Oceanobacillus

J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature - Genus Oceanobacillus

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (--->) only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 11
Number of subspecies cited in this file: 2

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").

Oceanobacillus Lu et al. 2002, gen. nov.
Type species: ¤ Oceanobacillus iheyensis Lu et al. 2002.
Etymology: L. Gr. n. okeanos, ocean; L. masc. n. bacillus, rod; N.L. masc. n. Oceanobacillus, an ocean rod.
References: VALIDATION LIST N° 85. Int. J. Syst. Evol. Microbiol., 2002, 52, 685-690. [LU (J.), NOGI (Y.) and TAKAMI (H.): Oceanobacillus iheyensis gen. nov., sp. nov., a deep-sea extremely halotolerant and alkaliphilic species isolated from a depth of 1050 m on the Iheya Ridge. FEMS Microbiol. Lett., 2001, 205, 291-297.]
Validation List N° 85 in IJSEM Online (PDF Format) - Effective publication Online

---> Oceanobacillus Lu et al. 2002 emend. Yumoto et al. 2005.
Type species: ¤ Oceanobacillus iheyensis Lu et al. 2002.
Etymology: L. Gr. n. okeanos, ocean; L. masc. n. bacillus, rod; N.L. masc. n. Oceanobacillus, an ocean rod.
Reference: YUMOTO (I.), HIROTA (K.), NODASAKA (Y.) and NAKAJIMA (K.): Oceanobacillus oncorhynchi sp. nov., a halotolerant obligate alkaliphile isolated from the skin of a rainbow trout (Oncorhynchus mykiss), and emended description of the genus Oceanobacillus. Int. J. Syst. Evol. Microbiol., 2005, 55, 1521-1524.
Original article in IJSEM Online

---> Oceanobacillus Lu et al. 2002 emend. Lee et al. 2006.
Type species: ¤ Oceanobacillus iheyensis Lu et al. 2002.
Etymology: L. Gr. n. okeanos, ocean; L. masc. n. bacillus, rod; N.L. masc. n. Oceanobacillus, an ocean rod.
Reference: LEE (J.S.), LIM (J.M.), LEE (K.C.), LEE (J.C.), PARK (Y.H.) and KIM (C.J.): Virgibacillus koreensis sp. nov., a novel bacterium from a salt field, and transfer of Virgibacillus picturae to the genus Oceanobacillus as Oceanobacillus picturae comb. nov. with emended descriptions. Int. J. Syst. Evol. Microbiol., 2006, 56, 251-257.
Original article in IJSEM Online

More information (in French)

Oceanobacillus caeni Nam et al. 2008, sp. nov.
Type strain (see also StrainInfo.net): strain S-11 = CCUG 53534 = CIP 109363 = KCTC 13061.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB275883.
Etymology: L. gen. n. caeni, of mud.
Reference: NAM (J.H.), BAE (W.) and LEE (D.H.): Oceanobacillus caeni sp. nov., isolated from a Bacillus-dominated wastewater treatment system in Korea. Int. J. Syst. Evol. Microbiol., 2008, 58, 1109-1113.
Original article in IJSEM Online

Oceanobacillus chironomi Raats and Halpern 2007, sp. nov.
Type strain (see also StrainInfo.net): strain T3944D = DSM 18262 = LMG 23627.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: DQ298074.
Etymology: N.L. gen. n. chironomi, of Chironomus, named after the non-biting midge insect of the genus Chironomus (Chironomidae: Diptera) from which the type strain was isolated.
Reference: RAATS (D.) and HALPERN (M.): Oceanobacillus chironomi sp. nov., a halotolerant and facultatively alkaliphilic species isolated from a chironomid egg mass. Int. J. Syst. Evol. Microbiol., 2007, 57, 255-259.
Original article in IJSEM Online

Oceanobacillus iheyensis Lu et al. 2002, sp. nov. (Type species of the genus).
Type strain (see also StrainInfo.net): strain HTE831 = JCM 11309 = DSM 14371.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB010863.
Etymology: N.L. masc. adj. iheyensis, pertaining to the Iheya Ridge, Okinawa Trough, Japan.
References: VALIDATION LIST N° 85. Int. J. Syst. Evol. Microbiol., 2002, 52, 685-690. [LU (J.), NOGI (Y.) and TAKAMI (H.): Oceanobacillus iheyensis gen. nov., sp. nov., a deep-sea extremely halotolerant and alkaliphilic species isolated from a depth of 1050 m on the Iheya Ridge. FEMS Microbiol. Lett., 2001, 205, 291-297.]
Validation List N° 85 in IJSEM Online (PDF Format) - Effective publication Online

Oceanobacillus kapialis Namwong et al. 2009, sp. nov.
Type strain (see also StrainInfo.net): strain SSK2-2 = KCTC 13177 = PCU 300 = TISTR 1858.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB366005.
Etymology: Korean n. ka-pi, shrimp paste; N.L. n. kapium, shrimp paste; L. suff. -alis, adjectival suffix meaning pertaining to; N.L. masc. adj. kapialis, pertaining to shrimp paste, the source of isolation.
Reference: NAMWONG (S.), TANASUPAWAT (S.), LEE (K.C.) and LEE (J.S.): Oceanobacillus kapialis sp. nov., from fermented shrimp paste in Thailand. Int. J. Syst. Evol. Microbiol., 2009, 59, 2254-2259.
Original article in IJSEM Online

Oceanobacillus kimchii Whon et al. 2011, sp. nov.
Type strain (see also StrainInfo.net): strain X50 = JCM 16803 = KACC 14914.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: GU784860.
Etymology: N.L. gen. n. kimchii, of/from kimchi, a traditional Korean fermented food.
References: VALIDATION LIST N° 139. Int. J. Syst. Evol. Microbiol., 2011, 61, 1011-1013. [WHON (T.W.), JUNG (M.J.), ROH (S.W.), NAM (Y.D.), PARK (E.J.), SHIN (K.S.) and BAE (J.W.): Oceanobacillus kimchii sp. nov. Isolated from a traditional Korean fermented food. J. Microbiol., 2010, 48, 862-866.]
Validation List N° 139 in IJSEM Online - Effective publication Online

Oceanobacillus locisalsi Lee et al. 2010, sp. nov.
Type strain (see also StrainInfo.net): strain CHL-21 = CCUG 56608 = KCTC 13253.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: EU817570.
Etymology: L. masc. n. locus, place; L. masc. adj. salsus, salted, salt; N.L. gen. n. locisalsi, of a salted place.
Reference: LEE (S.Y.), OH (T.K.), KIM (W.) and YOON (J.H.): Oceanobacillus locisalsi sp. nov., isolated from a marine solar saltern. Int. J. Syst. Evol. Microbiol., 2010, 60, 2758-2762.
Original article in IJSEM Online

Oceanobacillus neutriphilus Yang et al. 2010, sp. nov.
Type strain (see also StrainInfo.net): strain A1g = CGMCC 1.7693 = JCM 15776.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: EU709018.
Etymology: L. adj. neuter -tra -trum, neither the one nor the other, neither of two, which are neither active nor passive, used to refer to neutral pH; Gr. masc. adj. philos, friend loving; N.L. masc. adj. neutriphilus, preferring neutral pH.
Reference: YANG (J.Y.), HUO (Y.Y.), XU (X.W.), MENG (F.X.), WU (M.) and WANG (C.S.): Oceanobacillus neutriphilus sp. nov., isolated from activated sludge in a bioreactor. Int. J. Syst. Evol. Microbiol., 2010, 60, 2409-2414.
Original article in IJSEM Online

Oceanobacillus oncorhynchi Yumoto et al. 2005, sp. nov.
Type strain (see also StrainInfo.net): strain R-2 = JCM 12661 = NCIMB 14022.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB188089.
Etymology: N.L. gen. n. oncorhynchi, of Oncorhynchus, named after the rainbow trout Oncorhynchus mykiss, from which the type strain was isolated.
Reference: YUMOTO (I.), HIROTA (K.), NODASAKA (Y.) and NAKAJIMA (K.): Oceanobacillus oncorhynchi sp. nov., a halotolerant obligate alkaliphile isolated from the skin of a rainbow trout (Oncorhynchus mykiss), and emended description of the genus Oceanobacillus. Int. J. Syst. Evol. Microbiol., 2005, 55, 1521-1524.
Original article in IJSEM Online

---> Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006.
Type strain (see also StrainInfo.net): strain R-2 = JCM 12661 = NCIMB 14022.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB188089.
Etymology: N.L. gen. n. oncorhynchi, of Oncorhynchus, named after the rainbow trout Oncorhynchus mykiss, from which the type strain was isolated.
Reference: ROMANO, (I.), LAMA (L.), NICOLAUS (B.), POLI (A.), GAMBACORTA (A.) and GIORDANO (A.): Oceanobacillus oncorhynchi subsp. incaldanensis subsp. nov., an alkalitolerant halophile isolated from an algal mat collected from a sulfurous spring in Campania (Italy), and emended description of Oceanobacillus oncorhynchi. Int. J. Syst. Evol. Microbiol., 2006, 56, 805-810.
Original article in IJSEM Online

Note: Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006 is divided into subspecies (see: below).

More information (in French)

Oceanobacillus oncorhynchi subsp. incaldanensis Romano et al. 2006, subsp. nov.
Type strain (see also StrainInfo.net): strain 20AG = ATCC BAA-954 = DSM 16557.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AJ640134.
Etymology: N.L. masc. adj. incaldanensis, pertaining to the Incaldana site, southern Italy, where the type strain was isolated.
Reference: ROMANO, (I.), LAMA (L.), NICOLAUS (B.), POLI (A.), GAMBACORTA (A.) and GIORDANO (A.): Oceanobacillus oncorhynchi subsp. incaldanensis subsp. nov., an alkalitolerant halophile isolated from an algal mat collected from a sulfurous spring in Campania (Italy), and emended description of Oceanobacillus oncorhynchi. Int. J. Syst. Evol. Microbiol., 2006, 56, 805-810.
Original article in IJSEM Online

Oceanobacillus oncorhynchi subsp. oncorhynchi (Yumoto et al. 2005) Romano et al. 2006, subsp. nov.
Type strain (see also StrainInfo.net): strain R-2 = JCM 12661 = NCIMB 14022.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB188089.
Etymology: N.L. gen. n. oncorhynchi, of Oncorhynchus, named after the rainbow trout Oncorhynchus mykiss, from which the type strain was isolated.
Reference: ROMANO, (I.), LAMA (L.), NICOLAUS (B.), POLI (A.), GAMBACORTA (A.) and GIORDANO (A.): Oceanobacillus oncorhynchi subsp. incaldanensis subsp. nov., an alkalitolerant halophile isolated from an algal mat collected from a sulfurous spring in Campania (Italy), and emended description of Oceanobacillus oncorhynchi. Int. J. Syst. Evol. Microbiol., 2006, 56, 805-810.
Original article in IJSEM Online

Note: The original autorship, Yumoto et al. 2005, was corrected according to the new Rule 40d.
Reference: GARRITY (G.M.), LABEDA (D.P.) and OREN (A.): Judicial Commission of the International Committee on Systematics of Prokaryotes. XIIth International (IUMS) Congress of Bacteriology and Applied Microbiology. Minutes of the meetings, 3, 4 and 6 August 2008, Istanbul, Turkey. Int. J. Syst. Evol. Microbiol., 2011, 61, 2775-2780.
Original article in IJSEM Online

More information (in French)

Oceanobacillus picturae (Heyrman et al. 2003) Lee et al. 2006, comb. nov.
Type strain (see also StrainInfo.net): strain DSM 14867 = KCTC 3821 = LMG 19492.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AJ315060.
Basonym: ¤ Virgibacillus picturae Heyrman et al. 2003.
Etymology: L. gen. n. picturae, of a painting.
Reference: LEE (J.S.), LIM (J.M.), LEE (K.C.), LEE (J.C.), PARK (Y.H.) and KIM (C.J.): Virgibacillus koreensis sp. nov., a novel bacterium from a salt field, and transfer of Virgibacillus picturae to the genus Oceanobacillus as Oceanobacillus picturae comb. nov. with emended descriptions. Int. J. Syst. Evol. Microbiol., 2006, 56, 251-257.
Original article in IJSEM Online

Oceanobacillus profundus Kim et al. 2007, sp. nov.
Type strain (see also StrainInfo.net): strain CL-MP28 = DSM 18246 = KCCM 42318.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: DQ386635.
Etymology: L. masc. adj. profundus, deep, profound; intended to mean of/from the depths of the sea.
Reference: KIM (Y.G.), CHOI (D.H.), HYUN (S.) and CHO (B.C.): Oceanobacillus profundus sp. nov., isolated from a deep-sea sediment core. Int. J. Syst. Evol. Microbiol., 2007, 57, 409-413.
Original article in IJSEM Online

Oceanobacillus sojae corrig. Tominaga et al. 2009, sp. nov.
Type strain (see also StrainInfo.net): strain Y27 = CIP 109918 = JCM 15792 = NRRL B-59181.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB473561.
Etymology: N.L. gen. n. sojae, of soja, referring to the source of isolation.
References: VALIDATION LIST N° 130. Int. J. Syst. Evol. Microbiol., 2009, 59, 2647-2648 [TOMINAGA (T.), AN (S.Y.), OYAIZU (H.) and YOKOTA (A.): Oceanobacillus soja sp. nov. isolated from soy sauce production equipment in Japan. J. Gen. Appl. Microbiol., 2009, 55, 225-232.]
Validation List N° 130 in IJSEM Online - Effective publication Online

Notes:
1 The original spelling of the specific epithet, soja (sic), has been corrected on validation according to Rule 61.
Reference: ASSOCIATE EDITOR, IJSB: Validation List n° 130 (footnote #). Int. J. Syst. Evol. Microbiol., 2009, 59, 2647-2648.
Validation List N° 130 in IJSEM Online
2 The accession number CIP 109918 has been provided at the time of request for valid publication of the name.
Reference: ASSOCIATE EDITOR, IJSB: Validation List n° 130 (footnote **). Int. J. Syst. Evol. Microbiol., 2009, 59, 2647-2648.
Validation List N° 130 in IJSEM Online