Pandoraea

J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature - Genus Pandoraea

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (--->) only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 9
Number of subspecies cited in this file: 0

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").

Pandoraea Coenye et al. 2000, gen. nov.
Type species: ¤ Pandoraea apista Coenye et al. 200.
Etymology: N.L. fem. n. Pandoraea, referring to Pandora's box in Greek mythology, the origin of diseases of mankind.
Reference: COENYE (T.), FALSEN (E.), HOSTE (B.), OHLÉN (M.), GORIS (J.), GOVAN (J.R.W.), GILLIS (M.) and VANDAMME (P.): Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int. J. Syst. Evol. Microbiol., 2000, 50, 887-899.
Original article in IJSEM Online

Note: Based on the 16S rDNA sequence, SDS-PAGE, AFLP fingerprinting and biochemical data, the strain R-5199 (isolated from garden soil by Parsons et al. [1]) clearly is an another species of the genus Pandoraea Coenye et al. 2000. Coenye et al. [2] do not propose a formal name for this strain, pending the availability of similar isolates.
References:
1 PARSONS (J.R.), SIJM (D.T.H.), VAN LAAR (A.) and HUTZINGER (O.): Biodegradation of chlorinated biphenyls and benzoic acids by a Pseudomonas strain. Appl. Microbiol. Biotechnol., 1988, 29, 81-84.
2 COENYE (T.), FALSEN (E.), HOSTE (B.), OHLÉN (M.), GORIS (J.), GOVAN (J.R.W.), GILLIS (M.) and VANDAMME (P.): Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int. J. Syst. Evol. Microbiol., 2000, 50, 887-899.
Original article by Coenye et al. 2000 in IJSEM Online

Further concise information (in French)

Pandoraea apista Coenye et al. 2000, sp. nov. (Type species of the genus).
Type strain (see also StrainInfo.net): strain ATCC BAA-61 = CCUG 38412 = CIP 106627 = LMG 16407.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF139173.
Etymology: N.L. fem. adj. apista (from. Gr. adj. apistos), disloyal, unfaithful, treacherous.
Reference: COENYE (T.), FALSEN (E.), HOSTE (B.), OHLÉN (M.), GORIS (J.), GOVAN (J.R.W.), GILLIS (M.) and VANDAMME (P.): Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int. J. Syst. Evol. Microbiol., 2000, 50, 887-899.
Original article in IJSEM Online

Pandoraea faecigallinarum Sahin et al. 2011, sp. nov.
Type strain (see also StrainInfo.net): strain KOx = CCM 2766 = DSM 23572 = NBRC 106092.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB510957.
Etymology: L. n. faex faecis, the dregs, faeces; L. gen. pl. n. gallinarum, of hens; N.L. gen. pl. n. faecigallinarum, isolated from faeces of hens.
Reference: SAHIN (N.), TANI (A.), KOTAN (R.), SEDLÁČEK (I.), KIMBARA (K.) and TAMER (A.U.): Pandoraea oxalativorans sp. nov., Pandoraea faecigallinarum sp. nov. and Pandoraea vervacti sp. nov., isolated from oxalate-enriched culture. Int. J. Syst. Evol. Microbiol., 2011, 61, 2247-22533.
Original article in IJSEM Online

Pandoraea norimbergensis (Wittke et al. 1998) Coenye et al. 2000, comb. nov.
Type strain (see also StrainInfo.net): strain R2 = ATCC BAA-65 = CCUG 39188 = CFBP 4792 = DSM 11628 = CIP 105463 = JCM 10565 = LMG 18379.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: Y09879.
Basonym: ¤ Burkholderia norimbergensis Wittke et al. 1998.
Etymology: N.L. fem. adj. norimbergensis, pertaining to Nurnberg, referring to its place of isolation.
Reference: COENYE (T.), FALSEN (E.), HOSTE (B.), OHLÉN (M.), GORIS (J.), GOVAN (J.R.W.), GILLIS (M.) and VANDAMME (P.): Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int. J. Syst. Evol. Microbiol., 2000, 50, 887-899.
Original article in IJSEM Online

Pandoraea oxalativorans Sahin et al. 2011, sp. nov.
Type strain (see also StrainInfo.net): strain TA25 = CCM 7677 = DSM 23570 = NBRC 106091.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB469785.
Etymology: N.L. n. oxalas -atis, oxalate; L. part. adj. vorans, eating; N.L. part. adj. oxalativorans, oxalate-eating.
Reference: SAHIN (N.), TANI (A.), KOTAN (R.), SEDLÁČEK (I.), KIMBARA (K.) and TAMER (A.U.): Pandoraea oxalativorans sp. nov., Pandoraea faecigallinarum sp. nov. and Pandoraea vervacti sp. nov., isolated from oxalate-enriched culture. Int. J. Syst. Evol. Microbiol., 2011, 61, 2247-2253.
Original article in IJSEM Online

Pandoraea pnomenusa Coenye et al. 2000, sp. nov.
Type strain (see also StrainInfo.net): strain ATCC BAA-63 = CCUG 38742 = CIP 106626 = LMG 18087.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AY268170.
Etymology: Gr. n. pnoê, breath, breathing; Gr. v. menô, to stay, wait; N.L. fem. adj. pnomenusa, referring to the lung as the niche of these bacteria.
Reference: COENYE (T.), FALSEN (E.), HOSTE (B.), OHLÉN (M.), GORIS (J.), GOVAN (J.R.W.), GILLIS (M.) and VANDAMME (P.): Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int. J. Syst. Evol. Microbiol., 2000, 50, 887-899.
Original article in IJSEM Online

Pandoraea pulmonicola Coenye et al. 2000, sp. nov.
Type strain (see also StrainInfo.net): strain ATCC BAA-62 = CCUG 38759 = CIP 106625 = LMG 18106.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF139175.
Etymology: L. n. pulmo -onis, lung; L. suff. -cola (from L. n. incola), inhabitant, dweller; N.L. n. pulmonicola, lung-dweller, occurring in lungs.
Reference: COENYE (T.), FALSEN (E.), HOSTE (B.), OHLÉN (M.), GORIS (J.), GOVAN (J.R.W.), GILLIS (M.) and VANDAMME (P.): Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int. J. Syst. Evol. Microbiol., 2000, 50, 887-899.
Original article in IJSEM Online

Pandoraea sputorum Coenye et al. 2000, sp. nov.
Type strain (see also StrainInfo.net): strain ATCC BAA-64 = CCUG 45026 = CIP 106624 = LMG 18819.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF139176.
Etymology: L. n. sputum, spit, sputum; L. gen. pl. n. sputorum, of sputa.
Reference: COENYE (T.), FALSEN (E.), HOSTE (B.), OHLÉN (M.), GORIS (J.), GOVAN (J.R.W.), GILLIS (M.) and VANDAMME (P.): Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int. J. Syst. Evol. Microbiol., 2000, 50, 887-899.
Original article in IJSEM Online

Pandoraea thiooxydans Anandham et al. 2010, sp. nov.
Type strain (see also StrainInfo.net): strain ATSB16 = KACC 12757 = LMG 24779.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: EF397578.
Etymology: Gr. n. theion (Latin transliteration thium), sulfur; N.L. v. oxydo, to make acid, oxidize; N.L. part. adj. thiooxydans, oxidizing sulfur.
Reference: ANANDHAM (R.), INDIRAGANDHI (P.), KWON (S.W.), SA (T.M.), JEON (C.O.), KIM (Y.K.) and JEE (H.J.): Pandoraea thiooxydans sp. nov., a facultatively chemolithotrophic, thiosulfate-oxidizing bacterium isolated from rhizosphere soils of sesame (Sesamum indicum L.). Int. J. Syst. Evol. Microbiol., 2010, 60, 21-26.
Original article in IJSEM Online

Pandoraea vervacti Sahin et al. 2011, sp. nov.
Type strain (see also StrainInfo.net): strain NS15 = CCM 7667 = DSM 23571 = NBRC 106088.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB510956.
Etymology: L. gen. n. vervacti, of/from a fallow field, the source of the type strain.
Reference: SAHIN (N.), TANI (A.), KOTAN (R.), SEDLÁČEK (I.), KIMBARA (K.) and TAMER (A.U.): Pandoraea oxalativorans sp. nov., Pandoraea faecigallinarum sp. nov. and Pandoraea vervacti sp. nov., isolated from oxalate-enriched culture. Int. J. Syst. Evol. Microbiol., 2011, 61, 2247-2253.
Original article in IJSEM Online