Caldanaerobacter

J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature - Genus Caldanaerobacter

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (--->) only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 2
Number of subspecies cited in this file: 4

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").

Caldanaerobacter Fardeau et al. 2004, gen. nov.
Type species: ¤ Caldanaerobacter subterraneus (Fardeau et al. 2000) Fardeau et al. 2004.
Etymology: L. adj. caldus, hot; Gr. pref. an, not; Gr. n. aer aeros, air; N.L. masc. n. bacter, rod, staff; N.L. masc. n. Caldanaerobacter, rod that grows in the absence of air at high temperatures.
Reference: FARDEAU (M.L.), BONILLA SALINAS (M.), L'HARIDON (S.), JEANTHON (C.), VERHÉ (F.), CAYOL (J.L.), PATEL (B.K.C.), GARCIA (J.L.) and OLLIVIER (B.): Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus: reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel subspecies. Int. J. Syst. Evol. Microbiol., 2004, 54, 467-474.
Original article in IJSEM Online

Caldanaerobacter subterraneus (Fardeau et al. 2000) Fardeau et al. 2004, comb. nov. (Type species of the genus).
Type strain (see also StrainInfo.net): strain ATCC BAA-225 = CNCM I-2383 = DSM 13054 = SEBR 7858.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF195797.
Basonym: ¤ Thermoanaerobacter subterraneus Fardeau et al. 2000.
Etymology: L. masc. adj. subterraneus, underground, subterranean, describing its site of isolation.
Reference: FARDEAU (M.L.), BONILLA SALINAS (M.), L'HARIDON (S.), JEANTHON (C.), VERHÉ (F.), CAYOL (J.L.), PATEL (B.K.C.), GARCIA (J.L.) and OLLIVIER (B.): Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus: reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel subspecies. Int. J. Syst. Evol. Microbiol., 2004, 54, 467-474.
Original article in IJSEM Online

Note: CNCM is solely set up to deal with deposits on a confidential basis (i.e. patent deposits under the Budapest Treaty). Strain CNCM I-2383 is probably a patent deposit.

Caldanaerobacter subterraneus subsp. pacificus (Sokolova et al. 2001) Fardeau et al. 2004, comb. nov.
Type strain (see also StrainInfo.net): strain JM = ATCC BAA-271 = DSM 12653.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF174484.
Basonym: ¤ Carboxydibrachium pacificum corrig. Sokolova et al. 2001.
Etymology: L. masc. adj. pacificus, peaceful; pertaining to the Pacific Ocean, from the western part of which the type strain was isolated.
Reference: FARDEAU (M.L.), BONILLA SALINAS (M.), L'HARIDON (S.), JEANTHON (C.), VERHÉ (F.), CAYOL (J.L.), PATEL (B.K.C.), GARCIA (J.L.) and OLLIVIER (B.): Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus: reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel subspecies. Int. J. Syst. Evol. Microbiol., 2004, 54, 467-474.
Original article in IJSEM Online

Caldanaerobacter subterraneus subsp. subterraneus (Fardeau et al. 2000) Fardeau et al. 2004, subsp. nov.
Type strain (see also StrainInfo.net): strain ATCC BAA-225 = CNCM I-2383 = DSM 13054 = SEBR 7858.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF195797.
Etymology: L. masc. adj. subterraneus, underground, subterranean, describing its site of isolation.
Reference: FARDEAU (M.L.), BONILLA SALINAS (M.), L'HARIDON (S.), JEANTHON (C.), VERHÉ (F.), CAYOL (J.L.), PATEL (B.K.C.), GARCIA (J.L.) and OLLIVIER (B.): Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus: reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel subspecies. Int. J. Syst. Evol. Microbiol., 2004, 54, 467-474.
Original article in IJSEM Online

Note: CNCM is solely set up to deal with deposits on a confidential basis (i.e. patent deposits under the Budapest Treaty). Strain CNCM I-2383 is probably a patent deposit.

Caldanaerobacter subterraneus subsp. tengcongensis (Xue et al. 2001) Fardeau et al. 2004, comb. nov.
Type strain (see also StrainInfo.net): strain MB4 = Chinese Collection of Microorganisms AS 1.2430 = DSM 15242 = JCM 11007 = NBRC 100824.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AE008691 (complete genome).
Basonym: ¤ Thermoanaerobacter tengcongensis Xue et al. 2001.
Etymology: N.L. masc. adj. tengcongensis, pertaining to Tengcong, China.
Reference: FARDEAU (M.L.), BONILLA SALINAS (M.), L'HARIDON (S.), JEANTHON (C.), VERHÉ (F.), CAYOL (J.L.), PATEL (B.K.C.), GARCIA (J.L.) and OLLIVIER (B.): Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus: reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel subspecies. Int. J. Syst. Evol. Microbiol., 2004, 54, 467-474.
Original article in IJSEM Online

Caldanaerobacter subterraneus subsp. yonseiensis (Kim et al. 2001) Fardeau et al. 2004, comb. nov.
Type strain (see also StrainInfo.net): strain KB-1 = DSM 13777 = KFCC 11116 (patent strain).
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF212925.
Basonym: ¤ Thermoanaerobacter yonseiensis Kim et al. 2001.
Etymology: N.L. masc. adj. yonseiensis, pertaining to Yonsei University, Seoul, Korea, in recognition of its support of research on extreme thermophiles and their thermostable enzymes.
Reference: FARDEAU (M.L.), BONILLA SALINAS (M.), L'HARIDON (S.), JEANTHON (C.), VERHÉ (F.), CAYOL (J.L.), PATEL (B.K.C.), GARCIA (J.L.) and OLLIVIER (B.): Isolation from oil reservoirs of novel thermophilic anaerobes phylogenetically related to Thermoanaerobacter subterraneus: reassignment of T. subterraneus, Thermoanaerobacter yonseiensis, Thermoanaerobacter tengcongensis and Carboxydibrachium pacificum to Caldanaerobacter subterraneus gen. nov., sp. nov., comb. nov. as four novel subspecies. Int. J. Syst. Evol. Microbiol., 2004, 54, 467-474.
Original article in IJSEM Online

Caldanaerobacter uzonensis Kozina et al. 2010, sp. nov.
Type strain (see also StrainInfo.net): strain K67 = DSM 18923 = VKM B-2408.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: EF195126.
Etymology: N.L. masc. adj. uzonensis, pertaining to the Uzon Caldera, Kamchatka, Far-East Russia, from where the type strain was isolated.
Reference: KOZINA (I.V.), KUBLANOV (I.V.), KOLGANOVA (T.V.), CHERNYH (N.A.) and BONCH-OSMOLOVSKAYA (E.A.): Caldanaerobacter uzonensis sp. nov., an anaerobic, thermophilic, heterotrophic bacterium isolated from a hot spring. Int. J. Syst. Evol. Microbiol., 2010, 60, 1372-1375.
Original article in IJSEM Online