Peptoniphilus

J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature - Genus Peptoniphilus

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (--->) only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 8
Number of subspecies cited in this file: 0

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").

Peptoniphilus Ezaki et al. 2001, gen. nov.
Type species: ¤ Peptoniphilus asaccharolyticus (Distaso 1912) Ezaki et al. 2001.
Etymology: N.L. n. peptonum, peptone; N.L. adj. philus -a -um (from Gr. adj. philos -ê -on), friend, loving; N.L. masc. n. Peptoniphilus, friend of peptone, referring to the use of peptone as a major energy source.
Reference: EZAKI (T.), KAWAMURA (Y.), LI (N.), LI (Z.Y.), ZHAO (L.) and SHU (S.): Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus. Int. J. Syst. Evol. Microbiol., 2001, 51, 1521-1528.
Original article in IJSEM Online

More information (in French)

Peptoniphilus asaccharolyticus (Distaso 1912) Ezaki et al. 2001, comb. nov. (Type species of the genus).
Type strain (see also StrainInfo.net): strain ATCC 14963 = CCUG 9988 = CIP 74.17 = DSM 20463 = JCM 1765 = NCTC 11461.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF542228.
Basonym: ¤ Peptococcus asaccharolyticus (Distaso 1912) Douglas 1957 (Approved Lists 1980).
Other synonyms: ¤ Peptostreptococcus asaccharolyticus (Distaso 1912) Ezaki et al. 1983, "Staphylococcus asaccharolyticus" Distaso 1912, "Micrococcus asaccharolyticus" (Distaso 1912) Hall 1948.
Etymology: Gr. pref. a, not; Gr. n. sakchâr, sugar; N.L. masc. adj. lyticus (from Gr. masc. adj. lutikos), able to loose, able to dissolve; N.L. masc. adj. asaccharolyticus, not digesting sugar.
Reference: EZAKI (T.), KAWAMURA (Y.), LI (N.), LI (Z.Y.), ZHAO (L.) and SHU (S.): Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus. Int. J. Syst. Evol. Microbiol., 2001, 51, 1521-1528.
Original article in IJSEM Online

Note: According to Rules 27(3) and 30, this name is not validly published because the effective publication only documents deposit of the type strain in a single recognized culture collection. However, according to the Judicial Opinion 81, Peptoniphilus asaccharolyticus (Distaso 1912) Ezaki et al. 2001 is to be considered to be validly published.
References:
1 EUZÉBY (J.P.) and TINDALL (B.J.): Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an Opinion. Int. J. Syst. Evol. Microbiol., 2004, 54, 293-301.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81. Int. J. Syst. Evol. Microbiol., 2008, 58, 1755-1763.
Opinion 81 in IJSEM Online

Peptoniphilus gorbachii Song et al. 2010, sp. nov.
Type strain (see also StrainInfo.net): strain WAL 10418 = ATCC BAA-1383 = CCUG 53341 = JCM 15634.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: DQ911241.
Etymology: N.L. gen. masc. n. gorbachii, of Gorbach, to honor Sherwood Gorbach, who has contributed so much to our knowledge of anaerobic bacteriology.
References: VALIDATION LIST N° 134. Int. J. Syst. Evol. Microbiol., 2010, 60, 1477-1479 [SONG (Y.), LIU (C.) and FINEGOLD (S.M.): Peptoniphilus gorbachii sp. nov., Peptoniphilus olsenii sp. nov. and Anaerococcus murdochii sp. nov. isolated from clinical specimens of human origin. J. Clin. Microbiol., 2007, 45, 1746-1752.]
Validation List N° 134 in IJSEM Online - Effective publication Online

Peptoniphilus harei (Murdoch et al. 1997) Ezaki et al. 2001, comb. nov.
Type strain (see also StrainInfo.net): strain CCUG 38491 = CIP 105323 = DSM 10020 = NCTC 13076.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: Y07839.
Basonym: ¤ Peptostreptococcus harei Murdoch et al. 1997.
Etymology: N.L. gen. n. harei, of Hare, named after R. Hare, a British microbiologist.
Reference: EZAKI (T.), KAWAMURA (Y.), LI (N.), LI (Z.Y.), ZHAO (L.) and SHU (S.): Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus. Int. J. Syst. Evol. Microbiol., 2001, 51, 1521-1528.
Original article in IJSEM Online

Note: According to Rules 27(3) and 30, this name is not validly published because the effective publication only documents deposit of the type strain in a single recognized culture collection. However, according to the Judicial Opinion 81, Peptoniphilus harei (Murdoch et al. 1997) Ezaki et al. 2001 is to be considered to be validly published.
References:
1 EUZÉBY (J.P.) and TINDALL (B.J.): Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an Opinion. Int. J. Syst. Evol. Microbiol., 2004, 54, 293-301.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81. Int. J. Syst. Evol. Microbiol., 2008, 58, 1755-1763.
Opinion 81 in IJSEM Online

Peptoniphilus indolicus (Christiansen 1934) Ezaki et al. 2001, comb. nov.
Type strain (see also StrainInfo.net): strain ATCC 29427 = CCUG 17639 = CCUG 46591 = DSM 20464 = NCTC 11088.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AY153431.
Basonym: ¤ Peptococcus indolicus (Christiansen 1934) Sorensen 1975 (Approved Lists 1980).
Other synonyms: ¤ Peptostreptococcus indolicus (Christiansen 1934) Ezaki et al. 1983, "Micrococcus indolicus" Christiansen 1934.
Etymology: N.L. n. indolum, indol; L. masc. suff. -icus, suffix used with the sense of pertaining to; N.L. masc. adj. indolicus, pertaining to indole, referring to the ability of the organism to produce indole.
Reference: EZAKI (T.), KAWAMURA (Y.), LI (N.), LI (Z.Y.), ZHAO (L.) and SHU (S.): Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus. Int. J. Syst. Evol. Microbiol., 2001, 51, 1521-1528.
Original article in IJSEM Online

Note: According to Rules 27(3) and 30, this name is not validly published because the effective publication only documents deposit of the type strain in a single recognized culture collection. However, according to the Judicial Opinion 81, Peptoniphilus indolicus (Christiansen 1934) Ezaki et al. 2001 is to be considered to be validly published.
References:
1 EUZÉBY (J.P.) and TINDALL (B.J.): Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an Opinion. Int. J. Syst. Evol. Microbiol., 2004, 54, 293-301.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81. Int. J. Syst. Evol. Microbiol., 2008, 58, 1755-1763.
Opinion 81 in IJSEM Online

More information (in French)

Peptoniphilus ivorii (Murdoch et al. 1997) Ezaki et al. 2001, comb. nov.
Type strain (see also StrainInfo.net): strain CCUG 38492 = CIP 105325 = DSM 10022 = NCTC 13078.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: Y07840.
Basonym: ¤ Peptostreptococcus ivorii Murdoch et al. 1997.
Etymology: N.L. gen. n. ivorii, of Ivor, a British microbiologist who first isolated the organism.
Reference: EZAKI (T.), KAWAMURA (Y.), LI (N.), LI (Z.Y.), ZHAO (L.) and SHU (S.): Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus. Int. J. Syst. Evol. Microbiol., 2001, 51, 1521-1528.
Original article in IJSEM Online

Note: According to Rules 27(3) and 30, this name is not validly published because the effective publication only documents deposit of the type strain in a single recognized culture collection. However, according to the Judicial Opinion 81, Peptoniphilus ivorii (Murdoch et al. 1997) Ezaki et al. 2001 is to be considered to be validly published.
References:
1 EUZÉBY (J.P.) and TINDALL (B.J.): Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an Opinion. Int. J. Syst. Evol. Microbiol., 2004, 54, 293-301.
Original article in IJSEM Online
2 JUDICIAL COMMISSION OF THE INTERNATIONAL COMMITTEE ON SYSTEMATICS OF PROKARYOTES: Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81. Int. J. Syst. Evol. Microbiol., 2008, 58, 1755-1763.
Opinion 81 in IJSEM Online

Peptoniphilus lacrimalis (Li et al. 1992) Ezaki et al. 2001, comb. nov.
Type strain (see also StrainInfo.net): strain ATCC 51171 = CCUG 31350 = CIP 103724 = DSM 7455 = JCM 8139 = GIFU 7667 = NCTC 13149.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF542230.
Basonym: ¤ Peptostreptococcus lacrimalis Li et al. 1992.
Etymology: L. n. lacrima, a tear; L. masc. suff. -alis, suffix denoting pertaining to; N.L. masc. adj. lacrimalis, pertaining to tears, referring to lacrimal gland where the organism was isolated.
Reference: EZAKI (T.), KAWAMURA (Y.), LI (N.), LI (Z.Y.), ZHAO (L.) and SHU (S.): Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus. Int. J. Syst. Evol. Microbiol., 2001, 51, 1521-1528.
Original article in IJSEM Online

Peptoniphilus methioninivorax Rooney et al. 2011, sp. nov.
Type strain (see also StrainInfo.net): strain DSM 22461 = NRRL B-23883.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: GU440754.
Etymology: N.L. n. methioninum, methionine; L. adj. vorax, devouring, ravenous, voracious, consuming; N.L. masc. adj. methioninivorax, glycyl l-methionine-consuming.
Reference: ROONEY (A.P.), SWEZEY (J.L.), PUKALL (R.), SCHUMANN (P.) and SPRING (S.): Peptoniphilus methioninivorax sp. nov., a Gram-positive anaerobic coccus isolated from retail ground beef. Int. J. Syst. Evol. Microbiol., 2011, 61, 1962-1967.
Original article in IJSEM Online

Peptoniphilus olsenii Song et al. 2010, sp. nov.
Type strain (see also StrainInfo.net): strain WAL 12922 = ATCC BAA-1384 = CCUG 53342 = JCM 15635.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: DQ911242.
Etymology: N.L. gen. masc. n. olsenii, of Olsen, to honor Ingar Olsen, who has contributed much to our knowledge of anaerobic bacteriology.
References: VALIDATION LIST N° 134. Int. J. Syst. Evol. Microbiol., 2010, 60, 1477-1479 [SONG (Y.), LIU (C.) and FINEGOLD (S.M.): Peptoniphilus gorbachii sp. nov., Peptoniphilus olsenii sp. nov. and Anaerococcus murdochii sp. nov. isolated from clinical specimens of human origin. J. Clin. Microbiol., 2007, 45, 1746-1752.]
Validation List N° 134 in IJSEM Online - Effective publication Online