Stenotrophomonas

J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature - Genus Stenotrophomonas

Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (--->) only indicates the sequence of valid publication of names and does not mean that the last name in the sequence must be used (see: Introduction).

Number of species cited in this file: 13
Number of subspecies cited in this file: 0

Classification (Warning: see also the file "Classification of prokaryotes: Introduction").

Stenotrophomonas Palleroni and Bradbury 1993, gen. nov.
Type species: ¤ Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993.
Etymology: Gr. adj. stenos, narrow; Gr. n. trophos, feeder, rearer, one who feeds; Gr. fem. n. monas, a unit, monad; N.L. fem. n. Stenotrophomonas, a unit feeding on few substrates.
Reference: PALLERONI (N.J.) and BRADBURY (J.F.): Stenotrophomonas, a new bacterial genus for Xanthomonas maltophilia (Hugh 1980) Swings et al. 1983. Int. J. Syst. Bacteriol., 1993, 43, 606-609.
Original article in IJSEM Online

Stenotrophomonas acidaminiphila Assih et al. 2002, sp. nov.
Type strain (see also StrainInfo.net): strain AMX 19 = ATCC 700916 = CCUG 46887 = CIP 106456 = DSM 13117.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AF273080.
Etymology: N.L. n. acidum (from L. adj. acidus, sour), an acid; N.L. n. aminum, an amine; N.L. fem. adj. phila (from Gr. fem. adj. philê), friend, loving; N.L. fem. adj. acidaminiphila, loving amino acids.
Reference: ASSIH (E.A.), OUATTARA (A.S.), THIERRY (S.), CAYOL (J.L.), LABAT (M.) and MACARIE (H.): Stenotrophomonas acidaminiphila sp. nov., a strictly aerobic bacterium isolated from an upflow anaerobic sludge blanket (UASB) reactor. Int. J. Syst. Evol. Microbiol., 2002, 52, 559-568.
Original article in IJSEM Online

Stenotrophomonas africana Drancourt et al. 1997, sp. nov.
Type strain (see also StrainInfo.net): strain MGB = ATCC 700475 = CCUG 41684 = CIP 104854.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: U62646.
Etymology: L. fem. adj. africana, African, pertaining to Africa.
Reference: DRANCOURT (M.), BOLLET (C.) and RAOULT (D.): Stenotrophomonas africana sp. nov., an opportunistic human pathogen in Africa. Int. J. Syst. Bacteriol., 1997, 47, 160-163.
Original article in IJSEM Online

---> ¤ Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993.

Note: According to Coenye et al. 2004, Stenotrophomonas africana Drancourt et al. 1997 is a later heterotypic synonym of ¤ Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993.
Reference: COENYE (T.), VANLAERE (E.), FALSEN (E.) and VANDAMME (P.): Stenotrophomonas africana Drancourt et al. 1997 is a later synonym of Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993. Int. J. Syst. Evol. Microbiol., 2004, 54, 1235-1237.
Original article in IJSEM Online

Stenotrophomonas chelatiphaga Kaparullina et al. 2010, sp. nov.
Type strain (see also StrainInfo.net): strain LPM-5 = CCUG 57178 = DSM 21508 = VKM B-2486.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: EU573216.
Etymology: N.L. v. chelato (from Gr. n. chele, claw), to form claw-like complexes with cations, i.e. to chelate; Gr. v. phagein, to eat; N.L. fem. adj. chelatiphaga, chelates eating.
References: VALIDATION LIST N° 133. Int. J. Syst. Evol. Microbiol., 2010, 60, 1009-1010 [KAPARULLINA (E.), DORONINA (N.), CHISTYAKOVA (T.) and TROTSENKO (Y.): Stenotrophomonas chelatiphaga sp. nov., a new aerobic EDTA-degrading bacterium. Syst. Appl. Microbiol., 2009, 32, 157-162.]
Validation List N° 133 in IJSEM Online - Effective publication Online

Note: In the abstract of the effective publication, the type strain DSM 21508 is erroneously cited as DSM-21508.
Reference: ASSOCIATE EDITOR, IJSEM: Validation List n° 133 (footnote **). Int. J. Syst. Evol. Microbiol., 2010, 60, 1009-1010.
Validation List N° 133 in IJSEM Online

Stenotrophomonas daejeonensis Lee et al. 2011, sp. nov.
Type strain (see also StrainInfo.net): strain MJ03 = JCM 16244 = KCTC 22451.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: GQ241320.
Etymology: N.L. fem. adj. daejeonensis, of or pertaining to Daejeon, a city in South Korea, from where the type strain was isolated.
Reference: LEE (M.), WOO (S.G.), CHAE (M.), SHIN (M.C.), JUNG (H.M.) and TEN (L.N.): Stenotrophomonas daejeonensis sp. nov., isolated from sewage. Int. J. Syst. Evol. Microbiol., 2011, 61, 598-604.
Original article in IJSEM Online

Stenotrophomonas dokdonensis Yoon et al. 2006, sp. nov.
Type strain (see also StrainInfo.net): strain DS-16 = CIP 108839 = KCTC 12543.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: DQ178977.
Etymology: N.L. fem. adj. dokdonensis, pertaining to Dokdo, a Korean island, from where the organism was isolated.
Reference: YOON (J.H.), KANG (S.J.), OH (H.W.) and OH (T.K.): Stenotrophomonas dokdonensis sp. nov., isolated from soil. Int. J. Syst. Evol. Microbiol., 2006, 56, 1363-1367.
Original article in IJSEM Online

---> ¤ Pseudoxanthomonas dokdonensis (Yoon et al. 2006) Lee et al. 2008, comb. nov.

Stenotrophomonas ginsengisoli Kim et al. 2010, sp. nov.
Type strain (see also StrainInfo.net): strain DCY01 = KCTC 12539 = NBRC 101154.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: DQ109037.
Etymology: N.L. n. ginsengum, ginseng; L. n. solum, soil; N.L. gen. n. ginsengisoli, of soil of a ginseng field, the source of the type strain.
Reference: KIM (H.B.), SRINIVASAN (S.), SATHIYARAJ (G.), QUAN (L.H.), KIM (S.H.), BUI (T.P.N.), LIANG (Z.), KIM (Y.J.) and YANG (D.C.): Stenotrophomonas ginsengisoli sp. nov., isolated from a ginseng field. Int. J. Syst. Evol. Microbiol., 2010, 60, 1522-1526.
Original article in IJSEM Online

Stenotrophomonas humi Heylen et al. 2007, sp. nov.
Type strain (see also StrainInfo.net): strain R-32729 = DSM 18929 = LMG 23959.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AM403587.
Etymology: L. gen. n. humi, of/from soil.
Reference: HEYLEN (K.), VANPARYS (B.), PEIRSEGAELE (F.), LEBBE (L.) and DE VOS (P.): Stenotrophomonas terrae sp. nov. and Stenotrophomonas humi sp. nov., two nitrate-reducing bacteria isolated from soil. Int. J. Syst. Evol. Microbiol., 2007, 57, 2056-2061.
Original article in IJSEM Online

Stenotrophomonas koreensis Yang et al. 2006, sp. nov.
Type strain (see also StrainInfo.net): strain TR6-01 = JCM 13256 = KCTC 12211.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB166885.
Etymology: N.L. fem. adj. koreensis, pertaining to Korea, the location of the compost sample from which the type strain was isolated.
Reference: YANG (H.C.), IM (W.T.), KANG (M.S.), SHIN (D.Y.) and LEE (S.T.): Stenotrophomonas koreensis sp. nov., isolated from compost in South Korea. Int. J. Syst. Evol. Microbiol., 2006, 56, 81-84.
Original article in IJSEM Online

Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993, comb. nov. (Type species of the genus).
Type strain (see also StrainInfo.net): strain Stanier 67 = Hugh 810-2 = RH 1168 = AS 1.1788 = ATCC 13637 = CCUG 5866 = CFBP 3035 = CCM 1640 = BCRC (formerly CCRC) 10737 = CIP 60.77 = DSM 50170 = IAM 12423 = ICMP 17033 = IFO (now NBRC) 14161 = IMET 10402 = JCM 1975 = LMG 958 = NCAIM B.01119 = NCCB 68018 = NCIMB 9203 = NCPPB 1974 = NCTC 10257 = NRC 729 = NRRL B-2756 = VKM B-591.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AB294553.
Basonym: ¤ Pseudomonas maltophilia (ex Hugh and Ryschenkov 1961) Hugh 1981.
Other synonyms: ¤ Xanthomonas maltophilia (Hugh 1981) Swings et al. 1983, "Pseudomonas maltophilia" Hugh and Ryschenkow 1961.
Etymology: N.L. n. maltum, malt; Gr. n. philia, friendship; N.L. n. maltophilia, intended to mean friend of malt.
Reference: PALLERONI (N.J.) and BRADBURY (J.F.): Stenotrophomonas, a new bacterial genus for Xanthomonas maltophilia (Hugh 1980) Swings et al. 1983. Int. J. Syst. Bacteriol., 1993, 43, 606-609.
Original article in IJSEM Online

Notes:
1 Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993, ¤ Pseudomonas hibiscicola Moniz 1963 (Approved Lists 1980) and ¤ Pseudomonas beteli corrig. (Ragunathan 1928) Savulescu 1947 (Approved Lists 1980) are heterotypic synonyms [1]. Singer et al. 1994 (cited by Young et al. 1996 [2]) suggest that the type strain of Pseudomonas hibiscola and the type strain of Pseudomonas beteli (corrig.) are members of Stenotrophomonas maltophilia. However, according to the Bacteriological Code (1990 revision) the specific epithet beteli (corrig.) has priority.
References:
1 VAN DEN MOOTER (M.) and SWINGS (J.): Numerical analysis of 295 phenotypic features of 266 Xanthomonas strain and related strains and an improved taxonomy of the genus. Int. J. Syst. Bacteriol., 1990, 40, 348-369.
Original article in IJSEM Online
2 YOUNG (J.M.), SADDLER (G.S.), TAKIKAWA (Y.), DE BOER (S.H.), VAUTERIN (L.), GARDAN (L.), GVOZDYAK (R.I.) and STEAD (D.E.): Names of plant pathogenic bacteria 1864-1995. Review of plant pathology, 1996, 75, 721-763.
2 According to Coenye et al. 2004, Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993 is an earlier heterotypic synonym of ¤ Stenotrophomonas africana Drancourt et al. 1997.
Reference: COENYE (T.), VANLAERE (E.), FALSEN (E.) and VANDAMME (P.): Stenotrophomonas africana Drancourt et al. 1997 is a later synonym of Stenotrophomonas maltophilia (Hugh 1981) Palleroni and Bradbury 1993. Int. J. Syst. Evol. Microbiol., 2004, 54, 1235-1237.
Original article in IJSEM Online

Stenotrophomonas nitritireducens Finkmann et al. 2000, sp. nov.
Type strain (see also StrainInfo.net): strain L2 = ATCC BAA-12 = CCUG 46888 = CIP 107228 = DSM 12575 = JCM 13311.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AJ012229.
Etymology: N.L. nitritis -itis, nitrite; L. part. adj. reducens, leading back, bringing back and, in chemistry, converting to a different oxidation state; N.L. part. adj. nitritireducens, reducing nitrite.
Reference: FINKMANN (W.), ALTENDORF (K.), STACKEBRANDT (E.) and LIPSKI (A.): Characterization of N₂O-producing Xanthomonas-like isolates from biofilters as Stenotrophomonas nitritireducens sp. nov., Luteimonas mephitis gen. nov., sp. nov. and Pseudoxanthomonas broegbernensis gen. nov., sp. nov. Int. J. Syst. Evol. Microbiol., 2000, 50, 273-282.
Original article in IJSEM Online

Stenotrophomonas pavanii Ramos et al. 2011, sp. nov.
Type strain (see also StrainInfo.net): strain ICB 89 = CBMAI 564 = LMG 25348.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: FJ748683.
Etymology: N.L. gen. masc. n. pavanii, of Pavan, named in honour of the Brazilian geneticist Crodowaldo Pavan.
Reference: RAMOS (P.L.), VAN TRAPPEN (S.), THOMPSON (F.L.), ROCHA (R.C.S.), BARBOSA (H.R.), DE VOS (P.) and MOREIRA-FILHO (C.A.): Screening for endophytic nitrogen-fixing bacteria in Brazilian sugar cane varieties used in organic farming and description of Stenotrophomonas pavanii sp. nov. Int. J. Syst. Evol. Microbiol., 2011, 61, 926-931.
Original article in IJSEM Online

Stenotrophomonas rhizophila Wolf et al. 2002, sp. nov.
Type strain (see also StrainInfo.net): strain e-p10 = ATCC BAA-473 = CCUG 47042 = DSM 14405 = JCM 13333.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AJ293463.
Etymology: Gr. n. rhiza, root; N.L. fem. adj. phila (from Gr. fem. adj. philê), friend, loving; N.L. fem. adj. rhizophila, root-loving.
Reference: WOLF (A.), FRITZE (A.), HAGEMANN (M.) and BERG (G.): Stenotrophomonas rhizophila sp. nov., a novel plant-associated bacterium with antifungal properties. Int. J. Syst. Evol. Microbiol., 2002, 52, 1937-1944.
Original article in IJSEM Online

Stenotrophomonas terrae Heylen et al. 2007, sp. nov.
Type strain (see also StrainInfo.net): strain R-32768 = DSM 18941 = LMG 23958.
GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of the type strain: AM403589.
Etymology: L. gen. n. terrae, of/from soil.
Reference: HEYLEN (K.), VANPARYS (B.), PEIRSEGAELE (F.), LEBBE (L.) and DE VOS (P.): Stenotrophomonas terrae sp. nov. and Stenotrophomonas humi sp. nov., two nitrate-reducing bacteria isolated from soil. Int. J. Syst. Evol. Microbiol., 2007, 57, 2056-2061.
Original article in IJSEM Online